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openreadout/openreadout

openreadout/openreadout
Setup guide

What it does

Lets agents read raw lab-instrument files without vendor software: microscopy, mass spectrometry, chromatography, flow cytometry, NMR, electrophysiology, plate readers and qPCR. Returns metadata, images, spectra and traces as JSON, checks files for damage, and converts them to open formats (OME-TIFF, OME-Zarr, mzML, Parquet).

Local connectionPricing not confirmedv0.4.0

Connection manifest

Public connection metadata from the source. Follow the provider’s setup guide for authentication, permissions, and required variables.

{
  "name": "io.github.openreadout/openreadout",
  "version": "0.4.0",
  "repository": {
    "url": "https://github.com/openreadout/openreadout"
  },
  "remotes": [],
  "packages": [
    {
      "registryType": "npm",
      "identifier": "openreadout",
      "version": "0.4.0",
      "transport": {
        "type": "stdio"
      },
      "environmentVariables": []
    },
    {
      "registryType": "cargo",
      "identifier": "openreadout",
      "version": "0.4.0",
      "transport": {
        "type": "stdio"
      },
      "environmentVariables": []
    },
    {
      "registryType": "mcpb",
      "identifier": "https://github.com/openreadout/openreadout/releases/download/v0.4.0/openreadout-mcp-aarch64-apple-darwin.mcpb",
      "version": "",
      "transport": {
        "type": "stdio"
      },
      "environmentVariables": []
    },
    {
      "registryType": "mcpb",
      "identifier": "https://github.com/openreadout/openreadout/releases/download/v0.4.0/openreadout-mcp-aarch64-unknown-linux-musl.mcpb",
      "version": "",
      "transport": {
        "type": "stdio"
      },
      "environmentVariables": []
    },
    {
      "registryType": "mcpb",
      "identifier": "https://github.com/openreadout/openreadout/releases/download/v0.4.0/openreadout-mcp-x86_64-apple-darwin.mcpb",
      "version": "",
      "transport": {
        "type": "stdio"
      },
      "environmentVariables": []
    },
    {
      "registryType": "mcpb",
      "identifier": "https://github.com/openreadout/openreadout/releases/download/v0.4.0/openreadout-mcp-x86_64-pc-windows-msvc.mcpb",
      "version": "",
      "transport": {
        "type": "stdio"
      },
      "environmentVariables": []
    },
    {
      "registryType": "mcpb",
      "identifier": "https://github.com/openreadout/openreadout/releases/download/v0.4.0/openreadout-mcp-x86_64-unknown-linux-musl.mcpb",
      "version": "",
      "transport": {
        "type": "stdio"
      },
      "environmentVariables": []
    }
  ]
}
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